2010
Larion, M. and Miller, B. G. (2010) Global fit analysis of glucose binding curves reveals a minimal model for kinetic cooperativity in human glucokinase, Biochemistry 49, 8902-8911.
Desai, K. K., and Miller B. G. (2010) Recruitment of genes and enzymes conferring resistance to the nonnatural toxin bromoacetate, Proc. Natl. Acad. Sci. USA 107, 17968-17973.
Larion, M., Salinas, R.K., Bruschweiler-Li, L., Brüschweiler, R., and Miller B. G. (2010) Direct evidence for conformational heterogeneity in human pancreatic glucokinase from high-resolution NMR, Biochemistry 49, 7969-7971.
Conejo, M. S., Thompson, S. M., and Miller B. G. (2010) Evolutionary bases of carbohydrate recognition and substrate discrimination in the ROK protein family, J. Mol. Evol. 70, 545-556.
Desai, K. K., and Miller, B. G. (2010) L-Glyceraldehyde 3-phosphate reductase from Escherichia coli is a heme binding protein, Bioorg. Chem. 38, 37-41.
2009
Larion, M., and Miller, B. G. (2009) 23-residue C-terminal α-helix governs kinetic cooperativity in monomeric human glucokinase, Biochemistry 48, 6157-6165.
Desai, K. K.; Miller, B. G. (2009) Assessing and exploiting the persistence of substrate ambiguity in modern protein catalysts. In Protein Engineering Handbook; Bornscheuer, U. and Lutz, S. Eds. Wiley-VCH, 343-359.
Pal, P., and Miller, B. G. (2009) Activating mutations in the human glucokinase gene revealed by genetic selection, Biochemistry 48, 814-816.
2008
Desai, K. K., and Miller, B. G. (2008) A metabolic bypass of the triosephosphate isomerase reaction, Biochemistry 47, 7983-7985.
Van Vleet, J. L., Reinhardt, L. A., Miller, B. G., Sievers, A. and Cleland, W. W. (2008) Carbon isotope effect study on orotidine 5’-monophosphate decarboxylase: support for an anionic intermediate, Biochemistry 47, 798-803.
2007
Larion, M., Moore, L. B., Thompson, S. T., and Miller, B. G. (2007) Divergent evolution of function in the ROK sugar kinase superfamily: role of enzyme loops in substrate specificity, Biochemistry 46, 13564-13772.
Callahan, B. P. and Miller, B. G. (2007) OMP decarboxylase – an enigma persists, Bioorg. Chem. 35, 465-469.
Miller, B. G. (2007) The mutability of enzyme active-site shape determinants, Prot. Sci. 16, 1965-1968.
Dhar, P., Cao, Y., Kline, T., Pal, P., Swayne, C., Fischer, T., Miller, B., Sen, A. and Johansen, T. (2007) Autonomously moving local nanoprobes in heterogeneous magnetic fields, J. Phys. Chem. C. 111, 3607-3613.
Old School Publications
Miller, B. G., and Raines, R. T. (2005) Reconstitution of a defunct glycolytic pathway via recruitment of ambiguous sugar kinases, Biochemistry 44, 10776-10783.
Miller, B. G. (2004) Insight into the catalytic mechanism of orotidine 5´-phosphate decarboxylase from crystallography and mutagenesis, Topics in Curr. Chem. 238, 43-62.
Miller, B. G., and Raines, R. T. (2004) Identifying latent enzyme activities: substrate ambiguity within modern bacterial sugar kinases, Biochemistry 43, 6387-6392.
Miller, B. G., and Wolfenden, R. (2002) Catalytic proficiency: the unusual case of OMP decarboxylase, Annu. Rev. Biochem. 71, 847-885.
Miller, B. G., Snider, M. J., Wolfenden, R., and Short, S. A. (2001) Dissecting a charged network at the active site of orotidine 5´-phosphate decarboxylase, J. Biol. Chem. 276, 15174-15176.
Miller, B. G., Butterfoss, G. L., Short, S. A., and Wolfenden, R. (2001) Role for enzyme-ribofuranosyl contacts in the ground state and transition state for orotidine 5´-phosphate decarboxylase: a role for substrate destabilization? Biochemistry 40, 6227-6232.
Miller, B. G., Snider, M. J., Short, S. A., and Wolfenden, R. (2000) Contribution of enzyme-phosphoribosyl contacts to catalysis by orotidine 5´-phosphate decarboxylase, Biochemistry 39, 8113-8118.
Miller, B. G., Hassell, A. M., Milburn, M. V., and Short, S. A. (2000) Crystallization of native and selenomethionyl yeast orotidine 5´-phosphate decarboxylase, Acta Crystallogr. Sect. D: Biol. Crystallogr. 56, 474-474.
Miller, B. G., Hassell, A. M., Wolfenden, R., Milburn, M. V., and Short, S. A. (2000) Anatomy of a proficient enzyme: the structure of orotidine 5´-monophosphate decarboxylase in the presence and absence of a potential transition state analog, Proc. Natl. Acad. Sci. USA 97, 2011-2016.
Miller, B. G., Smiley, J. A., Short, S. A., and Wolfenden, R. (1999) Activity of yeast orotidine 5´-phosphate decarboxylase in the absence of metals, J. Biol. Chem. 274, 23841-23843.
Wolfenden, R., Snider, M., Ridgway, C., and Miller, B. (1999) The temperature dependence of enzyme rate enhancements, J. Am. Chem. Soc. 121, 7419-7420.
Miller, B. G., Traut, T. W., and Wolfenden, R. (1998) Effects of substrate binding determinants in the transition state for orotidine 5´-monophosphate decarboxylase, Bioorg. Chem. 26, 283-288.
Miller, B. G., Traut, T. W., and Wolfenden, R. (1998) A role for zinc in OMP decarboxylase, an unusually proficient enzyme, J. Am. Chem. Soc. 120, 2666-2667.